{"info":{"_postman_id":"827ed365-0d70-485b-8e63-64482521b8ab","name":"Ontoserver 6.0: example FHIR Terminology requests","description":"

Example usage of FHIR Terminology Services

\n

You will need to set the global variable url to your FHIR endpoint.

\n

For Ontoserver, set it to

\n

https://r4.ontoserver.csiro.au/fhir

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Create an AuditEvent resource to indicate the selection of a code following a search (ValueSet $expand with filter)

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Examples demonstrating the use of the AuditEvent resource

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The request sends two lookups - one of a LOINC code and one of a SNOMED CT code.

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Initialise the closure table

\n","urlObject":{"path":["$closure"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"de10df59-8ddf-4bee-8dc7-8d06d5bd9c4c"},{"name":"Step 2","event":[{"listen":"test","script":{"type":"text/javascript","exec":["tests[\"Status code is 200\"] = responseCode.code === 200;","","var jsonData = JSON.parse(responseBody);","tests[\"Response body is ConceptMap\"] = jsonData.resourceType === 'ConceptMap';","tests[\"ConceptMap is empty\"] = typeof jsonData.element === 'undefined';",""]}}],"id":"aab2af8c-8a32-464a-a824-8963aa8e6af4","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\" : \"Parameters\",\n \"parameter\" : [\n {\n \"name\" : \"name\",\n \"valueString\" : \"49088976-d54d-4d19-b868-3d4c18cebabb\"\n },\n {\n \"name\" : \"concept\",\n \"valueCoding\" : {\n \"system\" : \"http://snomed.info/sct\",\n \"code\" : \"22298006\"\n }\n }\n ]\n}"},"url":"{{url}}/$closure","description":"

Adding an initial concept to the table should not generate an entry in the resulting ConceptMap.

\n","urlObject":{"path":["$closure"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"aab2af8c-8a32-464a-a824-8963aa8e6af4"},{"name":"Step 3","event":[{"listen":"test","script":{"type":"text/javascript","exec":["tests[\"Status code is 200\"] = responseCode.code === 200;","","var jsonData = JSON.parse(responseBody);","tests[\"Response body is ConceptMap\"] = jsonData.resourceType === 'ConceptMap';","tests[\"ConceptMap is not empty\"] = typeof jsonData.group !== 'undefined';","tests[\"ConceptMap has one group\"] = jsonData.group.length === 1;","tests[\"ConceptMap has one element\"] = jsonData.group[0].element.length === 1;","tests[\"ConceptMap expected source value\"] = jsonData.group[0].element[0].code === '22298006';","tests[\"ConceptMap expected target value\"] = jsonData.group[0].element[0].target[0].code === '128599005';","tests[\"ConceptMap expected target relationship\"] = jsonData.group[0].element[0].target[0].equivalence === 'subsumes';","","",""]}}],"id":"598cca03-8c7b-4051-8cf6-1552a58095e6","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\" : \"Parameters\",\n \"parameter\" : [\n {\n \"name\" : \"name\",\n \"valueString\" : \"49088976-d54d-4d19-b868-3d4c18cebabb\"\n },\n {\n \"name\" : \"concept\",\n \"valueCoding\" : {\n \"system\" : \"http://snomed.info/sct\",\n \"code\" : \"128599005\"\n }\n }\n ]\n}"},"url":"{{url}}/$closure","description":"

Adding a second concept to the table should generate an entry in the resulting ConceptMap.

\n","urlObject":{"path":["$closure"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"598cca03-8c7b-4051-8cf6-1552a58095e6"},{"name":"Step 4","id":"dbf8d953-f502-447f-9248-31d77209433e","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\" : \"Parameters\",\n \"parameter\" : [\n {\n \"name\" : \"name\",\n \"valueString\" : \"49088976-d54d-4d19-b868-3d4c18cebabb\"\n },\n {\n \"name\" : \"concept\",\n \"valueCoding\" : {\n \"system\" : \"http://snomed.info/sct\",\n \"code\" : \"301095005\"\n }\n },\n {\n \"name\" : \"concept\",\n \"valueCoding\" : {\n \"system\" : \"http://snomed.info/sct\",\n \"code\" : \"298705000\"\n }\n },\n {\n \"name\" : \"concept\",\n \"valueCoding\" : {\n \"system\" : \"http://snomed.info/sct\",\n \"code\" : \"282729004\"\n }\n }\n ]\n}"},"url":"{{url}}/$closure","description":"

Adding multiple extra concepts may result in multiple maps.

\n","urlObject":{"path":["$closure"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"dbf8d953-f502-447f-9248-31d77209433e"},{"name":"Step 5","id":"6d007c06-a910-4289-9abf-b0d021c84741","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\" : \"Parameters\",\n \"parameter\" : [\n {\n \"name\" : \"name\",\n \"valueString\" : \"49088976-d54d-4d19-b868-3d4c18cebabb\"\n },\n {\n \"name\" : \"version\",\n \"valueId\" : \"0\"\n }\n ]\n}"},"url":"{{url}}/$closure","description":"

Reset to version 0 should give us all the edges computed so far.

\n","urlObject":{"path":["$closure"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"6d007c06-a910-4289-9abf-b0d021c84741"}],"id":"ab57aed9-ef8f-47db-99f8-5d3f021bcaae","description":"

Example usage of the $closure operation.

\n","event":[{"listen":"prerequest","script":{"id":"9e431641-8a4f-4269-a727-a2bd93f47c47","type":"text/javascript","exec":[""]}},{"listen":"test","script":{"id":"b7b54a97-d566-4744-954a-31a37ea0a37d","type":"text/javascript","exec":[""]}}],"_postman_id":"ab57aed9-ef8f-47db-99f8-5d3f021bcaae"},{"name":"CodeSystem Examples","item":[{"name":"Search all CodeSystems, return their names and urls","id":"73ee6be5-533f-4b93-bca0-ecfe08fc5eb7","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"{{url}}/CodeSystem?_elements=name,url","urlObject":{"path":["CodeSystem"],"host":["{{url}}"],"query":[{"key":"_elements","value":"name,url"}],"variable":[]}},"response":[],"_postman_id":"73ee6be5-533f-4b93-bca0-ecfe08fc5eb7"},{"name":"Create/Update a Code System","id":"ecd86a2b-d227-4b0d-8fff-f552bea8c955","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"PUT","header":[{"key":"Content-Type","value":"application/fhir+json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\" : \"CodeSystem\",\n \"id\" : \"v3-EducationLevel\",\n \"meta\" : {\n \"lastUpdated\" : \"2018-08-12T00:00:00.000+10:00\"\n },\n \"text\" : {\n \"status\" : \"generated\",\n \"div\" : \"

Release Date: 2018-08-12

\\r\\n\\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n \\r\\n
LevelCodeDisplayDefinition
1ASSOC Associate's or technical degree complete\\n Associate's or technical degree complete
\\r\\n\\n
1BD College or baccalaureate degree complete\\n College or baccalaureate degree complete
\\r\\n\\n
1ELEM Elementary School\\n Elementary School
\\r\\n\\n
1GD Graduate or professional Degree complete\\n Graduate or professional Degree complete
\\r\\n\\n
1HS High School or secondary school degree complete\\n High School or secondary school degree complete
\\r\\n\\n
1PB Some post-baccalaureate education\\n Some post-baccalaureate education
\\r\\n\\n
1POSTG Doctoral or post graduate education\\n Doctoral or post graduate education
\\r\\n\\n
1SCOL Some College education\\n Some College education
\\r\\n\\n
1SEC Some secondary or high school education\\n Some secondary or high school education
\\r\\n\\n
\\r\\n
\"\n },\n \"extension\" : [{\n \"url\" : \"http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status\",\n \"valueCode\" : \"external\"\n },\n {\n \"url\" : \"http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm\",\n \"valueInteger\" : 0\n }],\n \"url\" : \"http://terminology.hl7.org/CodeSystem/v3-EducationLevel\",\n \"identifier\" : [{\n \"system\" : \"urn:ietf:rfc:3986\",\n \"value\" : \"urn:oid:2.16.840.1.113883.5.1077\"\n }],\n \"version\" : \"2018-08-12\",\n \"name\" : \"v3.EducationLevel\",\n \"title\" : \"v3 Code System EducationLevel\",\n \"status\" : \"active\",\n \"experimental\" : false,\n \"date\" : \"2018-08-12T00:00:00+10:00\",\n \"publisher\" : \"HL7, Inc\",\n \"contact\" : [{\n \"telecom\" : [{\n \"system\" : \"url\",\n \"value\" : \"http://hl7.org\"\n }]\n }],\n \"description\" : \" Years of education that a person has completed\",\n \"caseSensitive\" : true,\n \"valueSet\" : \"http://terminology.hl7.org/ValueSet/v3-EducationLevel\",\n \"hierarchyMeaning\" : \"is-a\",\n \"content\" : \"complete\",\n \"concept\" : [{\n \"code\" : \"ASSOC\",\n \"display\" : \"Associate's or technical degree complete\",\n \"definition\" : \"Associate's or technical degree complete\"\n },\n {\n \"code\" : \"BD\",\n \"display\" : \"College or baccalaureate degree complete\",\n \"definition\" : \"College or baccalaureate degree complete\"\n },\n {\n \"code\" : \"ELEM\",\n \"display\" : \"Elementary School\",\n \"definition\" : \"Elementary School\"\n },\n {\n \"code\" : \"GD\",\n \"display\" : \"Graduate or professional Degree complete\",\n \"definition\" : \"Graduate or professional Degree complete\"\n },\n {\n \"code\" : \"HS\",\n \"display\" : \"High School or secondary school degree complete\",\n \"definition\" : \"High School or secondary school degree complete\"\n },\n {\n \"code\" : \"PB\",\n \"display\" : \"Some post-baccalaureate education\",\n \"definition\" : \"Some post-baccalaureate education\"\n },\n {\n \"code\" : \"POSTG\",\n \"display\" : \"Doctoral or post graduate education\",\n \"definition\" : \"Doctoral or post graduate education\"\n },\n {\n \"code\" : \"SCOL\",\n \"display\" : \"Some College education\",\n \"definition\" : \"Some College education\"\n },\n {\n \"code\" : \"SEC\",\n \"display\" : \"Some secondary or high school education\",\n \"definition\" : \"Some secondary or high school education\"\n }]\n}"},"url":"{{url}}/CodeSystem/v3-EducationLevel","urlObject":{"path":["CodeSystem","v3-EducationLevel"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"ecd86a2b-d227-4b0d-8fff-f552bea8c955"},{"name":"Read a Code System (as XML)","id":"ad47e5be-172b-4535-aed8-1f7e6c587a13","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"{{url}}/CodeSystem/v3-EducationLevel?_format=xml","description":"

Reads the latest version of a CodeSystem

\n","urlObject":{"path":["CodeSystem","v3-EducationLevel"],"host":["{{url}}"],"query":[{"key":"_format","value":"xml"}],"variable":[]}},"response":[],"_postman_id":"ad47e5be-172b-4535-aed8-1f7e6c587a13"},{"name":"Delete a Code System","id":"0ae03689-d322-4d0f-aa94-3e1341cee206","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"DELETE","header":[],"body":{"mode":"raw","raw":""},"url":"{{url}}/CodeSystem/v3-EducationLevel","urlObject":{"path":["CodeSystem","v3-EducationLevel"],"host":["{{url}}"],"query":[],"variable":[]}},"response":[],"_postman_id":"0ae03689-d322-4d0f-aa94-3e1341cee206"},{"name":"Search all CodeSystems with URLs starting with http://snomed.info","id":"c6bcaedb-c7f7-43e7-ad88-194394bf3c93","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"{{url}}/CodeSystem?url:below=http://snomed.info","urlObject":{"path":["CodeSystem"],"host":["{{url}}"],"query":[{"key":"url:below","value":"http://snomed.info"}],"variable":[]}},"response":[],"_postman_id":"c6bcaedb-c7f7-43e7-ad88-194394bf3c93"}],"id":"42edb837-6795-485a-b93c-14f82cf4d761","_postman_id":"42edb837-6795-485a-b93c-14f82cf4d761","description":""},{"name":"ConceptMap Examples","item":[{"name":"Search all ConceptMaps (in XML)","id":"112c2e7d-bc0f-48ab-b77c-a9515b602943","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"{{url}}/ConceptMap?_format=xml","urlObject":{"path":["ConceptMap"],"host":["{{url}}"],"query":[{"key":"_format","value":"xml"}],"variable":[]}},"response":[],"_postman_id":"112c2e7d-bc0f-48ab-b77c-a9515b602943"},{"name":"Create/Update a Concept Map","id":"67d88632-750e-44fe-a05b-490fb8cbf082","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"PUT","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"resourceType\": \"ConceptMap\",\n \"name\": \"EducationLevelMapping\",\n \"title\": \"Education Level Mapping\",\n \"meta\": {\n \"profile\": [\n \"http://hl7.org/fhir/StructureDefinition/shareableconceptmap\"\n ]\n },\n \"status\": \"draft\",\n \"contact\": [\n {\n \"telecom\": [\n {\n \"value\": \"john.smith@example.com\"\n }\n ],\n \"name\": \"John Smith\"\n }\n ],\n \"group\": [\n {\n \"source\": \"http://terminology.hl7.org/CodeSystem/v3-EducationLevel\",\n \"target\": \"http://snomed.info/sct\",\n \"element\": [\n {\n \"target\": [\n {\n \"code\": \"473461003\",\n \"equivalence\": \"equivalent\"\n }\n ],\n \"code\": \"HS\"\n },\n {\n \"target\": [\n {\n \"code\": \"224300008\",\n \"equivalence\": \"specializes\"\n }\n ],\n \"code\": \"BD\"\n }\n ]\n }\n ],\n \"url\": \"http://example.com/educationLevelMapping\",\n \"description\": \"A mapping between v3 education levels and snomed\",\n \"text\": {\n \"status\": \"generated\",\n \"div\": \"

Education Level Mapping

http://example.com/educationLevelMapping

A mapping between v3 education levels and snomed

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\n

Procedure map

\n Procedure map.url\n

Procedure map

\n
\n \n \n \n \n \n \n \n \n \n \n \n <status value=\"draft\"/>\n <experimental value=\"true\"/>\n <publisher value=\"me\"/>\n <date value=\"2016-07-21\"/>\n <description value=\"Procedure map\"/>\n <copyright value=\"copy\"/>\n <group>\n <source value=\"urn:Procedures.url\"/>\n <target value=\"http://snomed.info/sct\"/>\n <element>\n <code value=\"1\"/>\n <target>\n <code value=\"133860004\"/>\n <equivalence value=\"inexact\"/>\n </target>\n </element>\n <element>\n <code value=\"2\"/>\n <target>\n <code value=\"133860004\"/>\n <equivalence value=\"inexact\"/>\n </target>\n </element>\n <element>\n <code value=\"3\"/>\n <target>\n <code value=\"119631007\"/>\n <equivalence value=\"inexact\"/>\n </target>\n </element>\n </group>\n</ConceptMap>"},"url":"{{url}}/ConceptMap","description":"<p>Unlike a PUT, which will update a resource if it doesn't already exist, a POST will only create a new resource. 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