The following endpoints are used to support functionality of my Computational Biology project which is hosted on Replit
\n","schema":"https://schema.getpostman.com/json/collection/v2.0.0/collection.json","toc":[],"owner":"11153633","collectionId":"4ffcc5ea-2b9d-420a-a9cd-eb1ba9824e25","publishedId":"Uz5NhXhX","public":true,"customColor":{"top-bar":"5bc0de","right-sidebar":"000","highlight":"5bc0de"},"publishDate":"2022-06-10T10:25:52.000Z"},"item":[{"name":"sequence","id":"db9c0cb5-1190-4e2b-99fb-7ab482f0fad2","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/sequence/Melde","description":"This endpoint returns the scientific name, sequence and corresponding signal of a given species.
\n","urlObject":{"protocol":"https","path":["api","sequence","Melde"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"4f983a79-2a13-46b2-a928-5d57709bdcac","name":"200: OK","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/sequence/Melde"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"1081"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:52:27 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3280606; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"species\": \"Melde\",\n \"scientific_name\": \"Atriplex tatarica\",\n \"sequence\": \"GGTGTTACCTACGCTTTCATTC\",\n \"signal\": \"55555555555555555555555555555555555555555555555555555555555555555555555555555555555555552222222222222222222222222222222222222222222255555555555555555555555555555555555555555555222222222222222222222222222222222222222222222222222222222222222222222222222222222222222233333333333333333333333333333333333333333333444444444444444444444444444444444444444444444444444444444444444444444444444444444444444422222222222222222222222222222222222222222222333333333333333333333333333333333333333333334444444444444444444444444444444444444444444455555555555555555555555555555555555555555555444444444444444444444444444444444444444444442222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222224444444444444444444444444444444444444444444433333333333333333333333333333333333333333333222222222222222222222222222222222222222222222222222222222222222222222222222222222222222244444444444444444444444444444444444444444444\"\n}"},{"id":"5a7904a6-8d24-4355-b205-1df0637cbb91","name":"400: Bad Request","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/sequence/Meldess"},"status":"Bad Request","code":400,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"3"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 10:02:29 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3280004; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{}"}],"_postman_id":"db9c0cb5-1190-4e2b-99fb-7ab482f0fad2"},{"name":"dna","id":"7112f90c-cf41-420d-ac96-247011745413","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/dna","description":"Returns the model DNA sequences within the database.
\n","urlObject":{"protocol":"https","path":["api","dna"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"adc281b9-650c-4bb0-9638-c587f13361f9","name":"200: OK","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/dna"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"208"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:31:03 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3281890; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"DNA_SEQUENCES\": [\n \"CACTTAAGAATGAGAACTAAATAAGGT\",\n \"GTCTCTATCTGGTTAGGATTTCCGT\",\n \"GGAGTACAAGTCTATTCGTGGT\",\n \"TAGCAGTAGGATGCGTTCCA\",\n \"TGACCAATTATATCCCTAGACCC\",\n \"CCTGTTGTCGAACCACAGTAA\",\n \"GTGTGTCTTACAAATTCGGAGG\"\n ]\n}"}],"_postman_id":"7112f90c-cf41-420d-ac96-247011745413"},{"name":"species","id":"2a001d98-f52a-4924-9c51-a24af0fc6bd7","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/species","description":"Returns all the species recorded in the database.
\n","urlObject":{"protocol":"https","path":["api","species"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"c247398c-8b02-4055-8356-dac8af0e1e23","name":"200: OK","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/species"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"344"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:51:04 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3280689; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"species\": [\n \"Tijger\",\n \"Mug\",\n \"Olifant\",\n \"Leeuw\",\n \"Vos\",\n \"Koolmees\",\n \"Das\",\n \"Konijn\",\n \"Pad\",\n \"Vuursalamander\",\n \"Tbc-bacterie\",\n \"Darmbacterie\",\n \"Goudvis\",\n \"Blauwe-vinvis\",\n \"Ananas\",\n \"Melde\",\n \"Humboltspinguin\",\n \"Zwarte-beer\",\n \"Koninginepage\",\n \"Groene-schildpad\",\n \"Krokodil\",\n \"Pirhana\",\n \"Regenworm\",\n \"Vliegenzwam\",\n \"Kwal-porugees-oorslogsschip\"\n ]\n}"}],"_postman_id":"2a001d98-f52a-4924-9c51-a24af0fc6bd7"},{"name":"matcher","id":"66d8edae-3a98-4363-b0c3-c1f0a33ed892","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/matcher/species/Loxodonta%20cyclotis","description":"Returns a list of the closest match of a given mutated species or signal within the database.
\n","urlObject":{"protocol":"https","path":["api","matcher","species","Loxodonta%20cyclotis"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"1ff000ed-7c60-46dc-a823-1a54280f62d8","name":"200: OK matcher/signal","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/matcher/signal/2522222222222222222222222222222222222222222222222222222222222255555535555555555555555555555555555555555555555555555554444444444424444444444444444444444444444444444444443343333333333333333333333233333332343333335333333332233333333333333333343333333334333333333333333333333333333533333333333333542235333333333333333333333333333335535555555555555555555555555555555555555555555555555555522255522222222222222242222222222222222222222222255555555555555555555535555555555555553555555553333333333233333334333333333333333333533333333322355335235555555555554553555555555552555555555555555555553333333333332333353333333333333333333333333333343333353322222222222242222222222222222222232222222222522223333333333333333333233333333333333333333333333333333333333333333333333333333333334434334333333333333333333333335555555553545555555555555555455555555555555555555555535554444444444444444444444444444544444444444444535555555535555555255555555545555555555352222252224232222242422222422222222222222555535555555555555552555555555455455555555553333323333333333333233333333233333333333333\n"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"1635"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:33:06 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3281767; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"Description\": \"This is ordered from closest match to furthest match\",\n \"matches\": [\n \"Blauwe vinvis (Balaenoptera musculus): 179\",\n \"Enterococcus avium (Enterococcus avium): 545\",\n \"Olifant (Loxodonta cyclotis): 569\",\n \"Marchantia polymorpha (Marchantia polymorpha): 579\",\n \"Humboltspinguin (Spheniscus humboldti): 593\",\n \"Wilde tomatenplant (Solanum pennellii): 597\",\n \"Vos (Vlupes vulpes): 601\",\n \"Koninginepage (Papilio machaon): 601\",\n \"Watervliegenval (Aldrovanda vesiculosa): 604\",\n \"Tomatenplant (Solanum lycopersicum): 623\",\n \"Mug (Aedes albopictus): 630\",\n \"Das (Meles meles): 631\",\n \"Regenworm (Lumbricus terrestris): 631\",\n \"Vuursalamander (Salamandra salamandra): 633\",\n \"Goudvis (Carassius auratus): 645\",\n \"Katoenplant (Gossypium turneri): 648\",\n \"Blanford's fruit vleermuis (Sphaerias blanfordi): 652\",\n \"Krokodil (Ordo crocodilia): 654\",\n \"Panter danio (Danio aesculapii): 655\",\n \"Koolmees (Parus major minor): 659\",\n \"Zwarte beer (Ursus americanus): 663\",\n \"Candidatus (Candidatus_Giovannonibacteria): 664\",\n \"Siberische tijger (Panthera tigris altaica): 665\",\n \"Pad (Bufo baturae): 669\",\n \"Darmbacterie (Escherichia coli): 672\",\n \"Vliegenzwam (Amanita muscaria): 674\",\n \"Konijn (Oryctolagus cuniculus): 675\",\n \"Zwarte naaldsteenvlieg (Leuctra nigra): 677\",\n \"Kwal portugees oorslogsschip (Physalia physalis): 687\",\n \"Leeuw (Panthera leo): 706\",\n \"Roodvlekweekkever (Malachius bipustulatus): 707\",\n \"Gewone grasuil (Luperina testacea): 713\",\n \"Tuberculosis bacterie (Mycobacterium tuberculosis): 720\",\n \"Ananas (Ananas comosus): 750\",\n \"Piranha (Pygocentrus nattereri): 750\",\n \"Melde (Atriplex tatarica): 767\",\n \"Groene schildpad (Chelonia midas): 836\"\n ]\n}"},{"id":"333f9cc2-c0a6-4ef3-8acb-d3f3f4bcc244","name":"200: OK matcher/species","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/matcher/species/Loxodonta%20cyclotis"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"1635"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:35:33 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3281620; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"Description\": \"This is ordered from closest match to furthest match\",\n \"matches\": [\n \"Olifant (Loxodonta cyclotis): 219\",\n \"Watervliegenval (Aldrovanda vesiculosa): 429\",\n \"Katoenplant (Gossypium turneri): 448\",\n \"Vuursalamander (Salamandra salamandra): 670\",\n \"Blauwe vinvis (Balaenoptera musculus): 691\",\n \"Darmbacterie (Escherichia coli): 723\",\n \"Krokodil (Ordo crocodilia): 747\",\n \"Leeuw (Panthera leo): 754\",\n \"Vos (Vlupes vulpes): 768\",\n \"Panter danio (Danio aesculapii): 769\",\n \"Gewone grasuil (Luperina testacea): 777\",\n \"Pad (Bufo baturae): 804\",\n \"Melde (Atriplex tatarica): 806\",\n \"Das (Meles meles): 809\",\n \"Ananas (Ananas comosus): 809\",\n \"Koninginepage (Papilio machaon): 811\",\n \"Tomatenplant (Solanum lycopersicum): 817\",\n \"Zwarte naaldsteenvlieg (Leuctra nigra): 823\",\n \"Wilde tomatenplant (Solanum pennellii): 837\",\n \"Kwal portugees oorslogsschip (Physalia physalis): 837\",\n \"Enterococcus avium (Enterococcus avium): 838\",\n \"Roodvlekweekkever (Malachius bipustulatus): 838\",\n \"Konijn (Oryctolagus cuniculus): 842\",\n \"Piranha (Pygocentrus nattereri): 844\",\n \"Goudvis (Carassius auratus): 849\",\n \"Tuberculosis bacterie (Mycobacterium tuberculosis): 850\",\n \"Koolmees (Parus major minor): 851\",\n \"Zwarte beer (Ursus americanus): 851\",\n \"Candidatus (Candidatus_Giovannonibacteria): 859\",\n \"Vliegenzwam (Amanita muscaria): 862\",\n \"Marchantia polymorpha (Marchantia polymorpha): 869\",\n \"Groene schildpad (Chelonia midas): 876\",\n \"Siberische tijger (Panthera tigris altaica): 878\",\n \"Regenworm (Lumbricus terrestris): 879\",\n \"Humboltspinguin (Spheniscus humboldti): 886\",\n \"Blanford's fruit vleermuis (Sphaerias blanfordi): 888\",\n \"Mug (Aedes albopictus): 898\"\n ]\n}"}],"_postman_id":"66d8edae-3a98-4363-b0c3-c1f0a33ed892"},{"name":"mutatedDNA","id":"c1ae381e-d235-4501-b193-4da3b2bb45f1","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/mutatedDNA","description":"Returns a list of species of which the signals have been slightly mutated. This serves as test inputs for the matcher endpoint.
\n","urlObject":{"protocol":"https","path":["api","mutatedDNA"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"0f1c8a4b-a588-41c6-941c-13e8a07b4e1e","name":"200: OK","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/mutatedDNA"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"835"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:41:02 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3281291; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"MUTATED_DNA_SEQUENCES\": [\n \"Panthera tigris altaica\",\n \"Sphaerias blanfordi\",\n \"Solanum lycopersicum\",\n \"Solanum pennellii\",\n \"Aedes albopictus\",\n \"Marchantia polymorpha\",\n \"Loxodonta cyclotis\",\n \"Aldrovanda vesiculosa\",\n \"Gossypium turneri\",\n \"Panthera leo\",\n \"Leuctra nigra\",\n \"Vlupes vulpes\",\n \"Parus major minor\",\n \"Meles meles\",\n \"Oryctolagus cuniculus\",\n \"Bufo baturae\",\n \"Salamandra salamandra\",\n \"Mycobacterium tuberculosis\",\n \"Escherichia coli\",\n \"Carassius auratus\",\n \"Balaenoptera musculus\",\n \"Ananas comosus\",\n \"Atriplex tatarica\",\n \"Spheniscus humboldti\",\n \"Ursus americanus\",\n \"Papilio machaon\",\n \"Chelonia midas\",\n \"Ordo crocodilia\",\n \"Pygocentrus nattereri\",\n \"Lumbricus terrestris\",\n \"Enterococcus avium\",\n \"Candidatus_Giovannonibacteria\",\n \"Amanita muscaria\",\n \"Physalia physalis\",\n \"Luperina testacea\",\n \"Danio aesculapii\",\n \"Malachius bipustulatus\"\n ]\n}"}],"_postman_id":"c1ae381e-d235-4501-b193-4da3b2bb45f1"},{"name":"mutator","id":"d7e5abe5-7142-4d73-840c-adb16a2af1bc","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/mutator/55555555555555555555555555555555555555555555555555555555555555555555555555555555555555552222222222222222222222222222222222222222222255555555555555555555555555555555555555555555222222222222222222222222222222222222222222222222222222222222222222222222222222222222222233333333333333333333333333333333333333333333444444444444444444444444444444444444444444444444444444444444444444444444444444444444444422222222222222222222222222222222222222222222333333333333333333333333333333333333333333334444444444444444444444444444444444444444444455555555555555555555555555555555555555555555444444444444444444444444444444444444444444442222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222224444444444444444444444444444444444444444444433333333333333333333333333333333333333333333222222222222222222222222222222222222222222222222222222222222222222222222222222222222222244444444444444444444444444444444444444444444","description":"Given a signal in string form, this endpoint returns a slightly mutated signal.
\n","urlObject":{"protocol":"https","path":["api","mutator","55555555555555555555555555555555555555555555555555555555555555555555555555555555555555552222222222222222222222222222222222222222222255555555555555555555555555555555555555555555222222222222222222222222222222222222222222222222222222222222222222222222222222222222222233333333333333333333333333333333333333333333444444444444444444444444444444444444444444444444444444444444444444444444444444444444444422222222222222222222222222222222222222222222333333333333333333333333333333333333333333334444444444444444444444444444444444444444444455555555555555555555555555555555555555555555444444444444444444444444444444444444444444442222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222224444444444444444444444444444444444444444444433333333333333333333333333333333333333333333222222222222222222222222222222222222222222222222222222222222222222222222222222222222222244444444444444444444444444444444444444444444"],"host":["compbio-nanopore","johnchristianca","repl","co"],"query":[],"variable":[]}},"response":[{"id":"f04a3e46-3a1a-486d-8fa1-c3f9e7df6da1","name":"200: OK","originalRequest":{"method":"GET","header":[],"url":"https://compbio-nanopore.johnchristianca.repl.co/api/mutator/55555555555555555555555555555555555555555555555555555555555555555555555555555555555555552222222222222222222222222222222222222222222255555555555555555555555555555555555555555555222222222222222222222222222222222222222222222222222222222222222222222222222222222222222233333333333333333333333333333333333333333333444444444444444444444444444444444444444444444444444444444444444444444444444444444444444422222222222222222222222222222222222222222222333333333333333333333333333333333333333333334444444444444444444444444444444444444444444455555555555555555555555555555555555555555555444444444444444444444444444444444444444444442222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222224444444444444444444444444444444444444444444433333333333333333333333333333333333333333333222222222222222222222222222222222222222222222222222222222222222222222222222222222222222244444444444444444444444444444444444444444444"},"status":"OK","code":200,"_postman_previewlanguage":"json","header":[{"key":"Content-Length","value":"1148"},{"key":"Content-Type","value":"application/json"},{"key":"Date","value":"Fri, 10 Jun 2022 09:46:03 GMT"},{"key":"Expect-Ct","value":"max-age=2592000, report-uri=\"https://sentry.repl.it/api/10/security/?sentry_key=615192fd532445bfbbbe966cd7131791\""},{"key":"Replit-Cluster","value":"hacker"},{"key":"Server","value":"Werkzeug/2.1.2 Python/3.8.12"},{"key":"Strict-Transport-Security","value":"max-age=3280990; includeSubDomains"}],"cookie":[],"responseTime":null,"body":"{\n \"mutated_DNA\": \"555555554555552555555555555555555555522555555555555555555455555555555555555555455555555555555555555555555555555222222222322222242222222222222222222222522222224555555553555555545535555555555555335555555545555555555222222222222422222222224222222222222222222222222252322224222222222322222222222222445222222222222222555222223333333333335533333333333333333333333333333333333333333334444444444444444444444444444444444445544444444454444444444444444442244444444444444444444444444444444444444444444444444222222222222224222222333223222222222222222222433333333333333233333333343333333333343333333333533343333444433445532244444444444444444444444444444444444444445555555555545555555555555555555555555555525555555545555544444444455544444444444444554444444422222444444444444444442225522222222222222222225222222222222222222422222222222222222222232222222222222222245222322222225222222222222222222222522222252222222522222222222222222222222443244444444444444444454544444444344444443333333533334333333333333332333332342333333422222222222222222222222222222222222422222222222222322222222222222222222224225222444444444444455444442444242444444444444444\"\n}"}],"_postman_id":"d7e5abe5-7142-4d73-840c-adb16a2af1bc"}]}